Webmin stops working
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This is probably to be expected, Cloudron will essentially take over the whole server and generally installing things on the side is not supported and will break eventually. This is mostly because a platform like Cloudron needs to modify lots of system components to work as well as it makes it much easier to provide tested updates in an ongoing manner.
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Thanks, I am trying to wrap my head around how this works. The concepts seems great. If I have a docker app that I use, I am trying to understand how this works in this eco system. I may for example have to tweak a config file. Any way to do this without SSH? This is what I use Webmin for, for non linux people - I am also a noob
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This very much depends on the app you install. Often they have config files which can be edited (local to the container though, not the host system). For this the Cloudron dashboard has a webterminal into the app to edit or use the webbased filemanager with the built-in text editor.