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  3. After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace

After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace

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  • nebulonN Offline
    nebulonN Offline
    nebulon
    Staff
    wrote on last edited by
    #29

    So the docker daemon itself using journald via --log-driver=journald is correct. Also it is correct that the containers which are managed and started by Cloudron will have syslog in the LogConfig of the HostConfig. Also it should mention the syslog-address being unix://home/yellowtent/platformdata/logs/syslog.sock

    From what I can see in your post this all looks correct and as intended.

    Thus, none of the docker containers should log to journald or rsyslogd. Well at least if they were created by Cloudron itself of course to set those.

    Given that this is uptime kuma, which in turn is just using sqlite, this lead me to https://git.cloudron.io/platform/box/-/blob/master/src/services.js?ref_type=heads#L933 which indeed starts a container without specifying the cloudron logdriver configs. So that is probably one thing we should fix.

    This however would still mean the Gbs of sql dump logs just end up in another place. So the main issue then to fix is that sqlite3 app.db .dump which is run to create the sqldump also somehow logs to stdout/err despite redirectding stdou to the dump file....and that ends up in the logs somehow. I haven't found a fix yet but just to share the investigation here.

    1 Reply Last reply
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    • SansGuidonS Offline
      SansGuidonS Offline
      SansGuidon
      wrote on last edited by SansGuidon
      #30

      In the meantime, the problem still persists it seems

      root@ubuntu-cloudron-16gb-nbg1-3:~# du -sh /var/log/syslog*
      15G	/var/log/syslog
      26G	/var/log/syslog.1
      0	/var/log/syslog.1.gz-2025083120.backup
      52K	/var/log/syslog.2.gz
      4.0K	/var/log/syslog.3.gz
      4.0K	/var/log/syslog.4.gz
      

      Disk graph shows

        docker 25.9 GB
        docker-volumes 7.79 GB
        /apps.swap 4.29 GB
        platformdata 3.77 GB
        boxdata 58.34 MB
        maildata 233.47 kB
        Everything else (Ubuntu, etc) 48.67 GB
      
      root@ubuntu-cloudron-16gb-nbg1-3:~# truncate -s 0 /var/log/syslog
      root@ubuntu-cloudron-16gb-nbg1-3:~# truncate -s 0 /var/log/syslog.1
      

      After truncating the logs (see above), I reclaim the disk space, but I really need to work on a more effective patch / housekeeping job to prevent ๐Ÿ”ฅ

      This disk contains:
      
        docker 25.9 GB
        docker-volumes 8.02 GB
        /apps.swap 4.29 GB
        platformdata 3.8 GB
        boxdata 57.93 MB
        maildata 233.47 kB
        Everything else (Ubuntu, etc) 7.62 GB
      

      I would also love if the Cloudron disk usage view would be a graph like for CPU and Memory. Maybe it's already planned for Cloudron 9, otherwise should I mention that idea in a new thread, @nebulon ?

      About me / Now

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      • jamesJ Offline
        jamesJ Offline
        james
        Staff
        wrote on last edited by
        #31

        Hello @SansGuidon
        You mean the disk usage as a historical statistic and not only a singular point when checking?
        If this is what you mean, no that is not part of Cloudron 9 at the moment.
        But in my opinion, a very welcome feature request after Cloudron 9 is released!

        SansGuidonS 1 Reply Last reply
        3
        • jamesJ james

          Hello @SansGuidon
          You mean the disk usage as a historical statistic and not only a singular point when checking?
          If this is what you mean, no that is not part of Cloudron 9 at the moment.
          But in my opinion, a very welcome feature request after Cloudron 9 is released!

          SansGuidonS Offline
          SansGuidonS Offline
          SansGuidon
          wrote on last edited by SansGuidon
          #32

          @james said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

          Hello @SansGuidon
          You mean the disk usage as a historical statistic and not only a singular point when checking?
          If this is what you mean, no that is not part of Cloudron 9 at the moment.
          But in my opinion, a very welcome feature request after Cloudron 9 is released!

          Exactly, the idea is to be able to notice if something weird is happening (like disk usage growing constantly at a rapid rate)
          I'll make a proposal in a separate thread -> Follow up in https://forum.cloudron.io/topic/14292/add-historical-disk-usage-in-system-info-graphs-section

          About me / Now

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          • J Offline
            J Offline
            joseph
            Staff
            wrote on last edited by
            #33

            @SansGuidon afaik, Cloudron does not log anything to syslog . Did you happen to check what was inside that massive syslog file? In one of our production cloudrons (running for almost a decade):

            $ du -sh /var/log/syslog*
            5.1M	/var/log/syslog
            6.6M	/var/log/syslog.1
            800K	/var/log/syslog.2.gz
            796K	/var/log/syslog.3.gz
            812K	/var/log/syslog.4.gz
            
            1 Reply Last reply
            0
            • SansGuidonS Offline
              SansGuidonS Offline
              SansGuidon
              wrote on last edited by SansGuidon
              #34

              Hi @joseph

              root@ubuntu-cloudron-16gb-nbg1-3:~# du -sh /var/log/syslog*
              8.2G	/var/log/syslog
              0	/var/log/syslog.1
              0	/var/log/syslog.1.gz-2025083120.backup
              52K	/var/log/syslog.2.gz
              4.0K	/var/log/syslog.3.gz
              4.0K	/var/log/syslog.4.gz
              

              As mentioned earlier in the discussion , it's due to sqlite backup dumps of UptimeKuma which end in the wrong place.

              root@ubuntu-cloudron-16gb-nbg1-3:~# grep 'INSERT INTO' /var/log/syslog | wc -l
              47237303
              

              And I think this was started being investigated by @nebulon
              This generates a few GBs worth of waste per day on my Cloudron instance which causes regular outages (every few weeks)

              About me / Now

              J 1 Reply Last reply
              0
              • SansGuidonS Offline
                SansGuidonS Offline
                SansGuidon
                wrote on last edited by SansGuidon
                #35

                For now as a workaround I'm applying this patch, please advise if you have any concern with this ๐Ÿ™‚

                diff --git a/box/src/services.js b/box/src/services.js
                --- a/box/src/services.js
                +++ b/box/src/services.js
                @@ -1,7 +1,7 @@
                 'use strict';
                 
                 exports = module.exports = {
                     getServiceConfig,
                 
                     listServices,
                     getServiceStatus,
                @@ -308,7 +308,7 @@ async function backupSqlite(app, options) {
                     // we use .dump instead of .backup because it's more portable across sqlite versions
                     for (const p of options.paths) {
                         const outputFile =  path.join(paths.APPS_DATA_DIR, app.id, path.basename(p, path.extname(p)) + '.sqlite');
                 
                         // we could use docker exec but it may not work if app is restarting
                         const cmd = `sqlite3 ${p} ".dump"`;
                         const runCmd = `docker run --rm --name=sqlite-${app.id} \
                             --net cloudron \
                             -v ${volumeDataDir}:/app/data \
                             --label isCloudronManaged=true \
                -            --read-only -v /tmp -v /run ${app.manifest.dockerImage} ${cmd} > ${outputFile}`;
                +            --log-driver=none \
                +            --read-only -v /tmp -v /run ${app.manifest.dockerImage} ${cmd} > ${outputFile} 2>/dev/null`;
                 
                         await shell.bash(runCmd, { encoding: 'utf8' });
                     }
                 }
                
                

                About me / Now

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                • SansGuidonS SansGuidon

                  Hi @joseph

                  root@ubuntu-cloudron-16gb-nbg1-3:~# du -sh /var/log/syslog*
                  8.2G	/var/log/syslog
                  0	/var/log/syslog.1
                  0	/var/log/syslog.1.gz-2025083120.backup
                  52K	/var/log/syslog.2.gz
                  4.0K	/var/log/syslog.3.gz
                  4.0K	/var/log/syslog.4.gz
                  

                  As mentioned earlier in the discussion , it's due to sqlite backup dumps of UptimeKuma which end in the wrong place.

                  root@ubuntu-cloudron-16gb-nbg1-3:~# grep 'INSERT INTO' /var/log/syslog | wc -l
                  47237303
                  

                  And I think this was started being investigated by @nebulon
                  This generates a few GBs worth of waste per day on my Cloudron instance which causes regular outages (every few weeks)

                  J Offline
                  J Offline
                  joseph
                  Staff
                  wrote on last edited by joseph
                  #36

                  @SansGuidon I think @nebulon investigated and could not reproduce. We also run uptime kuma. Our logs are fine. Have you enabled backups inside uptime kuma or something else by any chance?

                  root@my:~# docker ps | grep uptime
                  cb00714073cb   cloudron/louislam.uptimekuma.app:202508221422060000    "/app/pkg/start.sh"      2 weeks ago    Up 2 weeks                                            ee6e4628-c370-4713-9cb6-f1888c32f8fb
                  root@my:~# du -sh /var/log/syslog*
                  352K	/var/log/syslog
                  904K	/var/log/syslog.1
                  116K	/var/log/syslog.2.gz
                  112K	/var/log/syslog.3.gz
                  112K	/var/log/syslog.4.gz
                  108K	/var/log/syslog.5.gz
                  112K	/var/log/syslog.6.gz
                  108K	/var/log/syslog.7.gz
                  root@my:~# grep 'INSERT INTO' /var/log/syslog | wc -l
                  0
                  
                  1 Reply Last reply
                  0
                  • J Offline
                    J Offline
                    joseph
                    Staff
                    wrote on last edited by joseph
                    #37

                    FWIW, our db is pretty big too.

                    image.png

                    @SansGuidon the command is just sqlite3 ${p} ".dump" and it is redirected to a file. Do you have any ideas of why this will log sql commands to syslog? I can't reproduce this by running the command manually.

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                    0
                    • SansGuidonS Offline
                      SansGuidonS Offline
                      SansGuidon
                      wrote on last edited by SansGuidon
                      #38

                      @joseph I don't see any special setting in UptimeKuma being applied in my instance. Can you try to reproduce with those instructions below? Hope that makes sense

                      Ensure your default logdriver is journald:

                      systemctl show docker -p ExecStart
                      

                      Should show something like

                      ExecStart={ path=/usr/bin/dockerd ; argv[]=/usr/bin/dockerd -H fd:// --log-driver=journald --exec-opt native.cgroupdriver=cgroupfs --storage-driver=overlay2 --experimental --ip6tables --use>
                      

                      Then try to mimic what backupSqlite() does (no log driver; redirect only outside docker run):

                      docker run --rm alpine sh -lc 'for i in $(seq 1 3); do echo "INSERT INTO t VALUES($i);"; done' > /tmp/out.sql
                      

                      Observe duplicates got logged to syslog anyway:

                      grep 'INSERT INTO t VALUES' /var/log/syslog | wc -l   # > 0
                      cat /tmp/out.sql | wc -l                              # same 3 lines
                      

                      Now repeat with logging disabled (what the fix does):

                      docker run --rm --log-driver=none alpine sh -lc 'for i in $(seq 1 3); do echo "INSERT INTO t VALUES($i);"; done' > /tmp/out2.sql
                      grep 'INSERT INTO t VALUES' /var/log/syslog | wc -l   # unchanged
                      

                      About me / Now

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                      • girishG Offline
                        girishG Offline
                        girish
                        Staff
                        wrote on last edited by girish
                        #39

                        @SansGuidon thanks for the repro. I have to say I can easily reproduce not only your test but also uptime kuma backup issue on my test Cloudron. At the same time, I have verified that @joseph's observation is also correct - our prod uptime kuma does not produce any spurious logs. Wonder what is going on... I am debugging.

                        1 Reply Last reply
                        3
                        • girishG Offline
                          girishG Offline
                          girish
                          Staff
                          wrote on last edited by
                          #40

                          @SansGuidon What is your ubuntu and docker version?

                          That Cloudron is on Ubuntu 20.04 and docker 27.3.1 . Here it's not reproducible.

                          My test cloudron is on 24.04 and docker 28.1.1 (it's from dev branch). Here it's reproducible.

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                          1
                          • SansGuidonS Offline
                            SansGuidonS Offline
                            SansGuidon
                            wrote on last edited by
                            #41

                            @girish Docker 27.3.1 and Ubuntu 24.04.2 LTS

                            About me / Now

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                            1
                            • girishG Offline
                              girishG Offline
                              girish
                              Staff
                              wrote on last edited by
                              #42

                              @SansGuidon thanks, fixed in https://git.cloudron.io/platform/box/-/commit/e45af9b611f4d0c3b77d4329aac24bacf98e4e6c . I could not figure out why it's not reproducible on that old Cloudron but I can reproduce it everywhere else . Maybe some Ubuntu 20.04 quirk .

                              Z 1 Reply Last reply
                              3
                              • SansGuidonS Offline
                                SansGuidonS Offline
                                SansGuidon
                                wrote on last edited by
                                #43

                                Nice! thanks @girish ๐Ÿ™‚

                                About me / Now

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                                • girishG girish

                                  @SansGuidon thanks, fixed in https://git.cloudron.io/platform/box/-/commit/e45af9b611f4d0c3b77d4329aac24bacf98e4e6c . I could not figure out why it's not reproducible on that old Cloudron but I can reproduce it everywhere else . Maybe some Ubuntu 20.04 quirk .

                                  Z Offline
                                  Z Offline
                                  zohup
                                  wrote last edited by
                                  #44

                                  @girish said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                  @SansGuidon thanks, fixed in https://git.cloudron.io/platform/box/-/commit/e45af9b611f4d0c3b77d4329aac24bacf98e4e6c . I could not figure out why it's not reproducible on that old Cloudron but I can reproduce it everywhere else . Maybe some Ubuntu 20.04 quirk .

                                  Can you guide me what commands to type? Thank you.

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                                  • jamesJ Offline
                                    jamesJ Offline
                                    james
                                    Staff
                                    wrote last edited by
                                    #45

                                    Hello @zohup
                                    This is fixed in Cloudron Version 9.

                                    SansGuidonS 1 Reply Last reply
                                    0
                                    • jamesJ james

                                      Hello @zohup
                                      This is fixed in Cloudron Version 9.

                                      SansGuidonS Offline
                                      SansGuidonS Offline
                                      SansGuidon
                                      wrote last edited by
                                      #46

                                      @james said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                      Hello @zohup
                                      This is fixed in Cloudron Version 9.

                                      I think what @zohup was asking is how to fix this in production environments which are still running Cloudron Version 8.

                                      About me / Now

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                                      • SansGuidonS SansGuidon referenced this topic
                                      • BrutalBirdieB BrutalBirdie

                                        Quickfix for users who need it NOW:

                                        # get patch file, apply and remove and restart cloudron-syslog.service
                                        cd /home/yellowtent/box
                                        wget https://git.cloudron.io/platform/box/-/commit/063b1024616706971d4a1f9c50b5032727640120.diff
                                        git apply 063b1024616706971d4a1f9c50b5032727640120.diff
                                        rm -v 063b1024616706971d4a1f9c50b5032727640120.diff
                                        systemctl restart cloudron-syslog.service
                                        
                                        Z Offline
                                        Z Offline
                                        zohup
                                        wrote last edited by zohup
                                        #47

                                        yes there it is, and it seems like that's the only way to fix it

                                        @SansGuidon said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                        @james said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                        Hello @zohup
                                        This is fixed in Cloudron Version 9.

                                        I think what @zohup was asking is how to fix this in production environments which are still running Cloudron Version 8.

                                        thanks for the quick fix! I applied it and it worked perfectly. ๐Ÿ‘
                                        @BrutalBirdie said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                        Quickfix for users who need it NOW:

                                        # get patch file, apply and remove and restart cloudron-syslog.service
                                        cd /home/yellowtent/box
                                        wget https://git.cloudron.io/platform/box/-/commit/063b1024616706971d4a1f9c50b5032727640120.diff
                                        git apply 063b1024616706971d4a1f9c50b5032727640120.diff
                                        rm -v 063b1024616706971d4a1f9c50b5032727640120.diff
                                        systemctl restart cloudron-syslog.service
                                        
                                        du -sh /var/log/syslog*
                                        truncate -s 0 /var/log/syslog
                                        truncate -s 0 /var/log/syslog.1
                                        
                                        1 Reply Last reply
                                        4
                                        • SansGuidonS Offline
                                          SansGuidonS Offline
                                          SansGuidon
                                          wrote last edited by
                                          #48

                                          Thanks @zohup !

                                          About me / Now

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