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  3. After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace

After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace

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  • SansGuidonS Offline
    SansGuidonS Offline
    SansGuidon
    wrote on last edited by SansGuidon
    #30

    In the meantime, the problem still persists it seems

    root@ubuntu-cloudron-16gb-nbg1-3:~# du -sh /var/log/syslog*
    15G	/var/log/syslog
    26G	/var/log/syslog.1
    0	/var/log/syslog.1.gz-2025083120.backup
    52K	/var/log/syslog.2.gz
    4.0K	/var/log/syslog.3.gz
    4.0K	/var/log/syslog.4.gz
    

    Disk graph shows

      docker 25.9 GB
      docker-volumes 7.79 GB
      /apps.swap 4.29 GB
      platformdata 3.77 GB
      boxdata 58.34 MB
      maildata 233.47 kB
      Everything else (Ubuntu, etc) 48.67 GB
    
    root@ubuntu-cloudron-16gb-nbg1-3:~# truncate -s 0 /var/log/syslog
    root@ubuntu-cloudron-16gb-nbg1-3:~# truncate -s 0 /var/log/syslog.1
    

    After truncating the logs (see above), I reclaim the disk space, but I really need to work on a more effective patch / housekeeping job to prevent ๐Ÿ”ฅ

    This disk contains:
    
      docker 25.9 GB
      docker-volumes 8.02 GB
      /apps.swap 4.29 GB
      platformdata 3.8 GB
      boxdata 57.93 MB
      maildata 233.47 kB
      Everything else (Ubuntu, etc) 7.62 GB
    

    I would also love if the Cloudron disk usage view would be a graph like for CPU and Memory. Maybe it's already planned for Cloudron 9, otherwise should I mention that idea in a new thread, @nebulon ?

    About me / Now

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    • jamesJ Offline
      jamesJ Offline
      james
      Staff
      wrote on last edited by
      #31

      Hello @SansGuidon
      You mean the disk usage as a historical statistic and not only a singular point when checking?
      If this is what you mean, no that is not part of Cloudron 9 at the moment.
      But in my opinion, a very welcome feature request after Cloudron 9 is released!

      SansGuidonS 1 Reply Last reply
      3
      • jamesJ james

        Hello @SansGuidon
        You mean the disk usage as a historical statistic and not only a singular point when checking?
        If this is what you mean, no that is not part of Cloudron 9 at the moment.
        But in my opinion, a very welcome feature request after Cloudron 9 is released!

        SansGuidonS Offline
        SansGuidonS Offline
        SansGuidon
        wrote on last edited by SansGuidon
        #32

        @james said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

        Hello @SansGuidon
        You mean the disk usage as a historical statistic and not only a singular point when checking?
        If this is what you mean, no that is not part of Cloudron 9 at the moment.
        But in my opinion, a very welcome feature request after Cloudron 9 is released!

        Exactly, the idea is to be able to notice if something weird is happening (like disk usage growing constantly at a rapid rate)
        I'll make a proposal in a separate thread -> Follow up in https://forum.cloudron.io/topic/14292/add-historical-disk-usage-in-system-info-graphs-section

        About me / Now

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        5
        • J Online
          J Online
          joseph
          Staff
          wrote on last edited by
          #33

          @SansGuidon afaik, Cloudron does not log anything to syslog . Did you happen to check what was inside that massive syslog file? In one of our production cloudrons (running for almost a decade):

          $ du -sh /var/log/syslog*
          5.1M	/var/log/syslog
          6.6M	/var/log/syslog.1
          800K	/var/log/syslog.2.gz
          796K	/var/log/syslog.3.gz
          812K	/var/log/syslog.4.gz
          
          1 Reply Last reply
          0
          • SansGuidonS Offline
            SansGuidonS Offline
            SansGuidon
            wrote on last edited by SansGuidon
            #34

            Hi @joseph

            root@ubuntu-cloudron-16gb-nbg1-3:~# du -sh /var/log/syslog*
            8.2G	/var/log/syslog
            0	/var/log/syslog.1
            0	/var/log/syslog.1.gz-2025083120.backup
            52K	/var/log/syslog.2.gz
            4.0K	/var/log/syslog.3.gz
            4.0K	/var/log/syslog.4.gz
            

            As mentioned earlier in the discussion , it's due to sqlite backup dumps of UptimeKuma which end in the wrong place.

            root@ubuntu-cloudron-16gb-nbg1-3:~# grep 'INSERT INTO' /var/log/syslog | wc -l
            47237303
            

            And I think this was started being investigated by @nebulon
            This generates a few GBs worth of waste per day on my Cloudron instance which causes regular outages (every few weeks)

            About me / Now

            J 1 Reply Last reply
            0
            • SansGuidonS Offline
              SansGuidonS Offline
              SansGuidon
              wrote on last edited by SansGuidon
              #35

              For now as a workaround I'm applying this patch, please advise if you have any concern with this ๐Ÿ™‚

              diff --git a/box/src/services.js b/box/src/services.js
              --- a/box/src/services.js
              +++ b/box/src/services.js
              @@ -1,7 +1,7 @@
               'use strict';
               
               exports = module.exports = {
                   getServiceConfig,
               
                   listServices,
                   getServiceStatus,
              @@ -308,7 +308,7 @@ async function backupSqlite(app, options) {
                   // we use .dump instead of .backup because it's more portable across sqlite versions
                   for (const p of options.paths) {
                       const outputFile =  path.join(paths.APPS_DATA_DIR, app.id, path.basename(p, path.extname(p)) + '.sqlite');
               
                       // we could use docker exec but it may not work if app is restarting
                       const cmd = `sqlite3 ${p} ".dump"`;
                       const runCmd = `docker run --rm --name=sqlite-${app.id} \
                           --net cloudron \
                           -v ${volumeDataDir}:/app/data \
                           --label isCloudronManaged=true \
              -            --read-only -v /tmp -v /run ${app.manifest.dockerImage} ${cmd} > ${outputFile}`;
              +            --log-driver=none \
              +            --read-only -v /tmp -v /run ${app.manifest.dockerImage} ${cmd} > ${outputFile} 2>/dev/null`;
               
                       await shell.bash(runCmd, { encoding: 'utf8' });
                   }
               }
              
              

              About me / Now

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              • SansGuidonS SansGuidon

                Hi @joseph

                root@ubuntu-cloudron-16gb-nbg1-3:~# du -sh /var/log/syslog*
                8.2G	/var/log/syslog
                0	/var/log/syslog.1
                0	/var/log/syslog.1.gz-2025083120.backup
                52K	/var/log/syslog.2.gz
                4.0K	/var/log/syslog.3.gz
                4.0K	/var/log/syslog.4.gz
                

                As mentioned earlier in the discussion , it's due to sqlite backup dumps of UptimeKuma which end in the wrong place.

                root@ubuntu-cloudron-16gb-nbg1-3:~# grep 'INSERT INTO' /var/log/syslog | wc -l
                47237303
                

                And I think this was started being investigated by @nebulon
                This generates a few GBs worth of waste per day on my Cloudron instance which causes regular outages (every few weeks)

                J Online
                J Online
                joseph
                Staff
                wrote on last edited by joseph
                #36

                @SansGuidon I think @nebulon investigated and could not reproduce. We also run uptime kuma. Our logs are fine. Have you enabled backups inside uptime kuma or something else by any chance?

                root@my:~# docker ps | grep uptime
                cb00714073cb   cloudron/louislam.uptimekuma.app:202508221422060000    "/app/pkg/start.sh"      2 weeks ago    Up 2 weeks                                            ee6e4628-c370-4713-9cb6-f1888c32f8fb
                root@my:~# du -sh /var/log/syslog*
                352K	/var/log/syslog
                904K	/var/log/syslog.1
                116K	/var/log/syslog.2.gz
                112K	/var/log/syslog.3.gz
                112K	/var/log/syslog.4.gz
                108K	/var/log/syslog.5.gz
                112K	/var/log/syslog.6.gz
                108K	/var/log/syslog.7.gz
                root@my:~# grep 'INSERT INTO' /var/log/syslog | wc -l
                0
                
                1 Reply Last reply
                0
                • J Online
                  J Online
                  joseph
                  Staff
                  wrote on last edited by joseph
                  #37

                  FWIW, our db is pretty big too.

                  image.png

                  @SansGuidon the command is just sqlite3 ${p} ".dump" and it is redirected to a file. Do you have any ideas of why this will log sql commands to syslog? I can't reproduce this by running the command manually.

                  1 Reply Last reply
                  0
                  • SansGuidonS Offline
                    SansGuidonS Offline
                    SansGuidon
                    wrote on last edited by SansGuidon
                    #38

                    @joseph I don't see any special setting in UptimeKuma being applied in my instance. Can you try to reproduce with those instructions below? Hope that makes sense

                    Ensure your default logdriver is journald:

                    systemctl show docker -p ExecStart
                    

                    Should show something like

                    ExecStart={ path=/usr/bin/dockerd ; argv[]=/usr/bin/dockerd -H fd:// --log-driver=journald --exec-opt native.cgroupdriver=cgroupfs --storage-driver=overlay2 --experimental --ip6tables --use>
                    

                    Then try to mimic what backupSqlite() does (no log driver; redirect only outside docker run):

                    docker run --rm alpine sh -lc 'for i in $(seq 1 3); do echo "INSERT INTO t VALUES($i);"; done' > /tmp/out.sql
                    

                    Observe duplicates got logged to syslog anyway:

                    grep 'INSERT INTO t VALUES' /var/log/syslog | wc -l   # > 0
                    cat /tmp/out.sql | wc -l                              # same 3 lines
                    

                    Now repeat with logging disabled (what the fix does):

                    docker run --rm --log-driver=none alpine sh -lc 'for i in $(seq 1 3); do echo "INSERT INTO t VALUES($i);"; done' > /tmp/out2.sql
                    grep 'INSERT INTO t VALUES' /var/log/syslog | wc -l   # unchanged
                    

                    About me / Now

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                    • girishG Offline
                      girishG Offline
                      girish
                      Staff
                      wrote on last edited by girish
                      #39

                      @SansGuidon thanks for the repro. I have to say I can easily reproduce not only your test but also uptime kuma backup issue on my test Cloudron. At the same time, I have verified that @joseph's observation is also correct - our prod uptime kuma does not produce any spurious logs. Wonder what is going on... I am debugging.

                      1 Reply Last reply
                      3
                      • girishG Offline
                        girishG Offline
                        girish
                        Staff
                        wrote on last edited by
                        #40

                        @SansGuidon What is your ubuntu and docker version?

                        That Cloudron is on Ubuntu 20.04 and docker 27.3.1 . Here it's not reproducible.

                        My test cloudron is on 24.04 and docker 28.1.1 (it's from dev branch). Here it's reproducible.

                        1 Reply Last reply
                        1
                        • SansGuidonS Offline
                          SansGuidonS Offline
                          SansGuidon
                          wrote on last edited by
                          #41

                          @girish Docker 27.3.1 and Ubuntu 24.04.2 LTS

                          About me / Now

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                          1
                          • girishG Offline
                            girishG Offline
                            girish
                            Staff
                            wrote on last edited by
                            #42

                            @SansGuidon thanks, fixed in https://git.cloudron.io/platform/box/-/commit/e45af9b611f4d0c3b77d4329aac24bacf98e4e6c . I could not figure out why it's not reproducible on that old Cloudron but I can reproduce it everywhere else . Maybe some Ubuntu 20.04 quirk .

                            Z 1 Reply Last reply
                            3
                            • SansGuidonS Offline
                              SansGuidonS Offline
                              SansGuidon
                              wrote on last edited by
                              #43

                              Nice! thanks @girish ๐Ÿ™‚

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                              • girishG girish

                                @SansGuidon thanks, fixed in https://git.cloudron.io/platform/box/-/commit/e45af9b611f4d0c3b77d4329aac24bacf98e4e6c . I could not figure out why it's not reproducible on that old Cloudron but I can reproduce it everywhere else . Maybe some Ubuntu 20.04 quirk .

                                Z Offline
                                Z Offline
                                zohup
                                wrote on last edited by
                                #44

                                @girish said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                @SansGuidon thanks, fixed in https://git.cloudron.io/platform/box/-/commit/e45af9b611f4d0c3b77d4329aac24bacf98e4e6c . I could not figure out why it's not reproducible on that old Cloudron but I can reproduce it everywhere else . Maybe some Ubuntu 20.04 quirk .

                                Can you guide me what commands to type? Thank you.

                                1 Reply Last reply
                                0
                                • jamesJ Offline
                                  jamesJ Offline
                                  james
                                  Staff
                                  wrote on last edited by
                                  #45

                                  Hello @zohup
                                  This is fixed in Cloudron Version 9.

                                  SansGuidonS 1 Reply Last reply
                                  0
                                  • jamesJ james

                                    Hello @zohup
                                    This is fixed in Cloudron Version 9.

                                    SansGuidonS Offline
                                    SansGuidonS Offline
                                    SansGuidon
                                    wrote on last edited by
                                    #46

                                    @james said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                    Hello @zohup
                                    This is fixed in Cloudron Version 9.

                                    I think what @zohup was asking is how to fix this in production environments which are still running Cloudron Version 8.

                                    About me / Now

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                                    • SansGuidonS SansGuidon referenced this topic on
                                    • BrutalBirdieB BrutalBirdie

                                      Quickfix for users who need it NOW:

                                      # get patch file, apply and remove and restart cloudron-syslog.service
                                      cd /home/yellowtent/box
                                      wget https://git.cloudron.io/platform/box/-/commit/063b1024616706971d4a1f9c50b5032727640120.diff
                                      git apply 063b1024616706971d4a1f9c50b5032727640120.diff
                                      rm -v 063b1024616706971d4a1f9c50b5032727640120.diff
                                      systemctl restart cloudron-syslog.service
                                      
                                      Z Offline
                                      Z Offline
                                      zohup
                                      wrote on last edited by zohup
                                      #47

                                      yes there it is, and it seems like that's the only way to fix it

                                      @SansGuidon said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                      @james said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                      Hello @zohup
                                      This is fixed in Cloudron Version 9.

                                      I think what @zohup was asking is how to fix this in production environments which are still running Cloudron Version 8.

                                      thanks for the quick fix! I applied it and it worked perfectly. ๐Ÿ‘
                                      @BrutalBirdie said in After Ubuntu 22/24 Upgrade syslog getting spammed and grows way to much clogging up the diskspace:

                                      Quickfix for users who need it NOW:

                                      # get patch file, apply and remove and restart cloudron-syslog.service
                                      cd /home/yellowtent/box
                                      wget https://git.cloudron.io/platform/box/-/commit/063b1024616706971d4a1f9c50b5032727640120.diff
                                      git apply 063b1024616706971d4a1f9c50b5032727640120.diff
                                      rm -v 063b1024616706971d4a1f9c50b5032727640120.diff
                                      systemctl restart cloudron-syslog.service
                                      
                                      du -sh /var/log/syslog*
                                      truncate -s 0 /var/log/syslog
                                      truncate -s 0 /var/log/syslog.1
                                      
                                      1 Reply Last reply
                                      4
                                      • SansGuidonS Offline
                                        SansGuidonS Offline
                                        SansGuidon
                                        wrote on last edited by
                                        #48

                                        Thanks @zohup !

                                        About me / Now

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                                        With your input, this post could be even better ๐Ÿ’—

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