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  3. Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task

Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task

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dockerupdates
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  • girishG girish

    Ok, I think maybe this is storage box related.

    @p44 @imc67 @jdaviescoates are you guys using storage box/ CIFS ?

    jdaviescoatesJ Offline
    jdaviescoatesJ Offline
    jdaviescoates
    wrote on last edited by
    #33

    @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

    Ok, I think maybe this is storage box related.

    @p44 @imc67 @jdaviescoates are you guys using storage box/ CIFS ?

    Yes, indeed I am, @avatar1024 too, I think.

    But I've been using it for ages before hitting this problem.

    Saying that, previously it was a filesystem mount and not a CIFS.

    Well, it was a CIFS, but not set-up by Cloudron, manually set-up by editing fstab following these instructions https://docs.hetzner.com/robot/storage-box/access/access-samba-cifs

    Anyways, I only started hitting this issue once I moved from Hetzner Cloud VPS to Netcup vServer.

    I use Cloudron with Gandi & Hetzner

    girishG 1 Reply Last reply
    0
    • jdaviescoatesJ jdaviescoates

      @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

      Ok, I think maybe this is storage box related.

      @p44 @imc67 @jdaviescoates are you guys using storage box/ CIFS ?

      Yes, indeed I am, @avatar1024 too, I think.

      But I've been using it for ages before hitting this problem.

      Saying that, previously it was a filesystem mount and not a CIFS.

      Well, it was a CIFS, but not set-up by Cloudron, manually set-up by editing fstab following these instructions https://docs.hetzner.com/robot/storage-box/access/access-samba-cifs

      Anyways, I only started hitting this issue once I moved from Hetzner Cloud VPS to Netcup vServer.

      girishG Offline
      girishG Offline
      girish
      Staff
      wrote on last edited by
      #34

      @jdaviescoates Initial hypothesis is that maybe hetzner storage box had a "reset" on their side . CIFS mounts are not auto-mounted (whether by Cloudron or not) because the mount system doesn't have such a feature. So, we were thinking the backups stopped working and when they stop working, updates were getting stuck.

      jdaviescoatesJ 1 Reply Last reply
      1
      • girishG girish

        @jdaviescoates Initial hypothesis is that maybe hetzner storage box had a "reset" on their side . CIFS mounts are not auto-mounted (whether by Cloudron or not) because the mount system doesn't have such a feature. So, we were thinking the backups stopped working and when they stop working, updates were getting stuck.

        jdaviescoatesJ Offline
        jdaviescoatesJ Offline
        jdaviescoates
        wrote on last edited by
        #35

        @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

        @jdaviescoates Initial hypothesis is that maybe hetzner storage box had a "reset" on their side . CIFS mounts are not auto-mounted (whether by Cloudron or not) because the mount system doesn't have such a feature. So, we were thinking the backups stopped working and when they stop working, updates were getting stuck.

        Thanks for investigating, but I'm not sure that is it.

        I only say that because right now I've got 3 apps stuck on "Updating - Cleaning up old install"

        c9371a8b-1ad7-4c01-80a7-3416006c1684-image.png

        043f88d6-c407-44da-8475-f9b79ea89227-image.png

        489a6e92-da88-4a1f-a01f-44efd50dd799-image.png

        And yet the backup drive is mounted fine:

        Screenshot from 2022-11-21 11-07-30.png

        I use Cloudron with Gandi & Hetzner

        1 Reply Last reply
        0
        • girishG Offline
          girishG Offline
          girish
          Staff
          wrote on last edited by
          #36

          Thanks for @jdaviescoates for access to his system.

          Basically, docker just stops working for some reason. The command below just hangs.

          root@v2202211129685206445:/home/yellowtent/platformdata/logs/70b06ed9-1257-46d1-9fe9-1ffa7c722f21# docker stop d3ef55aa711f8d424f53bbef6a5ac813e9670cf89e77eaa171762dc524610ebc
          

          I see that docker is a few versions behind and there is a bunch of stuff related to locks and races, I have gone ahead and updated docker. @jdaviescoates Can you let me know if you hit this again? In the meantime, I will put the docker update in our ci for 7.3.3.

          jdaviescoatesJ 1 Reply Last reply
          2
          • girishG girish

            Thanks for @jdaviescoates for access to his system.

            Basically, docker just stops working for some reason. The command below just hangs.

            root@v2202211129685206445:/home/yellowtent/platformdata/logs/70b06ed9-1257-46d1-9fe9-1ffa7c722f21# docker stop d3ef55aa711f8d424f53bbef6a5ac813e9670cf89e77eaa171762dc524610ebc
            

            I see that docker is a few versions behind and there is a bunch of stuff related to locks and races, I have gone ahead and updated docker. @jdaviescoates Can you let me know if you hit this again? In the meantime, I will put the docker update in our ci for 7.3.3.

            jdaviescoatesJ Offline
            jdaviescoatesJ Offline
            jdaviescoates
            wrote on last edited by
            #37

            @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

            Thanks for @jdaviescoates for access to his system.

            You're welcome! Thanks for investigating.

            @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

            Can you let me know if you hit this again?

            Will do!

            @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

            I will put the docker update in our ci for 7.3.3

            Presumably until 7.3.3 is released and I upgrade I'll likely keep hitting this issue, right?

            I use Cloudron with Gandi & Hetzner

            girishG 1 Reply Last reply
            0
            • jdaviescoatesJ jdaviescoates

              @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

              Thanks for @jdaviescoates for access to his system.

              You're welcome! Thanks for investigating.

              @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

              Can you let me know if you hit this again?

              Will do!

              @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

              I will put the docker update in our ci for 7.3.3

              Presumably until 7.3.3 is released and I upgrade I'll likely keep hitting this issue, right?

              girishG Offline
              girishG Offline
              girish
              Staff
              wrote on last edited by
              #38

              @jdaviescoates I updated the docker on your server already . That's why, please let us know if you hit the issue again (which then means that docker upgrade didn't fix the issue).

              But regardless, I will keep the docker update as part of 7.3.3 unless something else breaks. So, you won't have troubles after updating as well.

              jdaviescoatesJ humptydumptyH 2 Replies Last reply
              1
              • girishG girish

                @jdaviescoates I updated the docker on your server already . That's why, please let us know if you hit the issue again (which then means that docker upgrade didn't fix the issue).

                But regardless, I will keep the docker update as part of 7.3.3 unless something else breaks. So, you won't have troubles after updating as well.

                jdaviescoatesJ Offline
                jdaviescoatesJ Offline
                jdaviescoates
                wrote on last edited by
                #39

                @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                @jdaviescoates I updated the docker on your server already . That's why, please let us know if you hit the issue again (which then means that docker upgrade didn't fix the issue).

                Ah, right, got it, thanks! Will see what happens going forward...

                I use Cloudron with Gandi & Hetzner

                1 Reply Last reply
                0
                • girishG girish

                  Ok, I think maybe this is storage box related.

                  @p44 @imc67 @jdaviescoates are you guys using storage box/ CIFS ?

                  imc67I Offline
                  imc67I Offline
                  imc67
                  translator
                  wrote on last edited by
                  #40

                  @girish for backups yes

                  1 Reply Last reply
                  0
                  • jdaviescoatesJ Offline
                    jdaviescoatesJ Offline
                    jdaviescoates
                    wrote on last edited by jdaviescoates
                    #41

                    @girish I'm sorry to report that it doesn't seem outdated Docker was the issue because I noticed there were still outstanding updates to run and so clicked on one and the exact same thing has happened:

                    fef35d30-cd72-459d-a391-f4ec93cf1dab-image.png

                    I've left it exactly as is if you want to go and have another poke around my server to see what you can discover...

                    I use Cloudron with Gandi & Hetzner

                    jdaviescoatesJ 1 Reply Last reply
                    0
                    • girishG girish

                      @jdaviescoates I updated the docker on your server already . That's why, please let us know if you hit the issue again (which then means that docker upgrade didn't fix the issue).

                      But regardless, I will keep the docker update as part of 7.3.3 unless something else breaks. So, you won't have troubles after updating as well.

                      humptydumptyH Offline
                      humptydumptyH Offline
                      humptydumpty
                      wrote on last edited by
                      #42

                      @girish I'm using Contabo's NVMe Storage Extension ( it's different than their Object storage) that doubles my storage. Do you think that has anything to do with it?

                      When I got it, I had to do the standard Ubuntu partition expansion commands to get it set up. What type of storage would this be? CIFS?

                      jdaviescoatesJ 1 Reply Last reply
                      0
                      • humptydumptyH humptydumpty

                        @girish I'm using Contabo's NVMe Storage Extension ( it's different than their Object storage) that doubles my storage. Do you think that has anything to do with it?

                        When I got it, I had to do the standard Ubuntu partition expansion commands to get it set up. What type of storage would this be? CIFS?

                        jdaviescoatesJ Offline
                        jdaviescoatesJ Offline
                        jdaviescoates
                        wrote on last edited by
                        #43

                        @humptydumpty said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                        Do you think that has anything to do with it?

                        I don't think so because lots of us who aren't using Contabo at all are experiencing the same thing.

                        I use Cloudron with Gandi & Hetzner

                        humptydumptyH 1 Reply Last reply
                        0
                        • jdaviescoatesJ jdaviescoates

                          @humptydumpty said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                          Do you think that has anything to do with it?

                          I don't think so because lots of us who aren't using Contabo at all are experiencing the same thing.

                          humptydumptyH Offline
                          humptydumptyH Offline
                          humptydumpty
                          wrote on last edited by
                          #44

                          @jdaviescoates You mentioned you're using storage box and I'm using some sort of storage expansion. Also, Girish mentioned it's a "known" Contabo issue. I'm interested to know if other Contabo users are also using storage expansion. Maybe that's the common factor/issue here?

                          jdaviescoatesJ 1 Reply Last reply
                          0
                          • jdaviescoatesJ jdaviescoates

                            @girish I'm sorry to report that it doesn't seem outdated Docker was the issue because I noticed there were still outstanding updates to run and so clicked on one and the exact same thing has happened:

                            fef35d30-cd72-459d-a391-f4ec93cf1dab-image.png

                            I've left it exactly as is if you want to go and have another poke around my server to see what you can discover...

                            jdaviescoatesJ Offline
                            jdaviescoatesJ Offline
                            jdaviescoates
                            wrote on last edited by
                            #45

                            @jdaviescoates said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                            @girish I'm sorry to report that it doesn't seem outdated Docker was the issue because I noticed there were still outstanding updates to run and so clicked on one and the exact same thing has happened:

                            fef35d30-cd72-459d-a391-f4ec93cf1dab-image.png

                            I've left it exactly as is if you want to go and have another poke around my server to see what you can discover...

                            Did you login to my server again and poke around with this? Because I note that that update has now completed (and I didn't intervene myself).

                            So, I figured I'd hit update on another app to see what happens, but same thing:

                            f540aaaf-a51a-4840-be4d-421b7febcedb-image.png

                            I use Cloudron with Gandi & Hetzner

                            girishG 1 Reply Last reply
                            0
                            • jdaviescoatesJ jdaviescoates

                              @jdaviescoates said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                              @girish I'm sorry to report that it doesn't seem outdated Docker was the issue because I noticed there were still outstanding updates to run and so clicked on one and the exact same thing has happened:

                              fef35d30-cd72-459d-a391-f4ec93cf1dab-image.png

                              I've left it exactly as is if you want to go and have another poke around my server to see what you can discover...

                              Did you login to my server again and poke around with this? Because I note that that update has now completed (and I didn't intervene myself).

                              So, I figured I'd hit update on another app to see what happens, but same thing:

                              f540aaaf-a51a-4840-be4d-421b7febcedb-image.png

                              girishG Offline
                              girishG Offline
                              girish
                              Staff
                              wrote on last edited by
                              #46

                              @jdaviescoates yes, sorry, I am investigating on the server. I am able to reproduce this quite reliably, though I have no clue yet what is causing the issue.

                              jdaviescoatesJ 1 Reply Last reply
                              1
                              • humptydumptyH humptydumpty

                                @jdaviescoates You mentioned you're using storage box and I'm using some sort of storage expansion. Also, Girish mentioned it's a "known" Contabo issue. I'm interested to know if other Contabo users are also using storage expansion. Maybe that's the common factor/issue here?

                                jdaviescoatesJ Offline
                                jdaviescoatesJ Offline
                                jdaviescoates
                                wrote on last edited by
                                #47

                                @humptydumpty said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                                Maybe that's the common factor/issue here?

                                That was an initial theory of @girish too, but e.g. @fbartels has also hit this issue and he isn't using external storage at all afaiu

                                I use Cloudron with Gandi & Hetzner

                                humptydumptyH 1 Reply Last reply
                                0
                                • jdaviescoatesJ jdaviescoates

                                  @humptydumpty said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                                  Maybe that's the common factor/issue here?

                                  That was an initial theory of @girish too, but e.g. @fbartels has also hit this issue and he isn't using external storage at all afaiu

                                  humptydumptyH Offline
                                  humptydumptyH Offline
                                  humptydumpty
                                  wrote on last edited by humptydumpty
                                  #48

                                  @jdaviescoates Oh, I see.

                                  I just want to add that uninstalling apps gets stuck too. I installed Searx earlier and didn't like it and now I can't get rid of it (until tonight when I can restart the server).

                                  It's stuck at " Uninstalling - Deleting image ".

                                  Edit: Ending the task and retrying the uninstall actually deleted it without restarting the server.

                                  girishG 1 Reply Last reply
                                  1
                                  • girishG girish

                                    @jdaviescoates yes, sorry, I am investigating on the server. I am able to reproduce this quite reliably, though I have no clue yet what is causing the issue.

                                    jdaviescoatesJ Offline
                                    jdaviescoatesJ Offline
                                    jdaviescoates
                                    wrote on last edited by
                                    #49

                                    @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                                    I am able to reproduce this quite reliably, though I have no clue yet what is causing the issue.

                                    Fingers and toes crossed you'll be able to work it out!

                                    I use Cloudron with Gandi & Hetzner

                                    1 Reply Last reply
                                    1
                                    • humptydumptyH humptydumpty

                                      @jdaviescoates Oh, I see.

                                      I just want to add that uninstalling apps gets stuck too. I installed Searx earlier and didn't like it and now I can't get rid of it (until tonight when I can restart the server).

                                      It's stuck at " Uninstalling - Deleting image ".

                                      Edit: Ending the task and retrying the uninstall actually deleted it without restarting the server.

                                      girishG Offline
                                      girishG Offline
                                      girish
                                      Staff
                                      wrote on last edited by
                                      #50

                                      @humptydumpty said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                                      It's stuck at " Uninstalling - Deleting image ".

                                      Yup, that's exactly where I have narrowed it down to. Something deep in dockerode a node module we use. Because docker itself is responding fine.

                                      1 Reply Last reply
                                      2
                                      • girishG Offline
                                        girishG Offline
                                        girish
                                        Staff
                                        wrote on last edited by
                                        #51

                                        I narrowed it down to image delete API call not getting a response. I wrote a simple example and that works 😞 So, some strange issue in the docker-modem module. Unfortunately, there's a lot of code there to investigate.

                                        I do still wonder why this happens just now...!

                                        'use strict';
                                        
                                        const http = require('http');
                                        
                                        const opts = {
                                          path: '/images/cloudron/org.moodle.cloudronapp:20220912-100537-1689a722e?force=false&noprune=false',
                                          method: 'DELETE',
                                          headers: {},
                                          key: undefined,
                                          cert: undefined,
                                          ca: undefined,
                                          socketPath: '/var/run/docker.sock'
                                        };
                                        
                                        const req = http.request(opts, function () { });
                                        req.on('response', function (res) {
                                            console.log('got a response');
                                            res.on('data', function () { console.log('data'); });
                                            res.on('end', function () { console.log('ended'); });
                                        });
                                        req.on('error', function (error) {
                                            console.log(error);
                                        });
                                        
                                        req.end();
                                        
                                        jdaviescoatesJ 1 Reply Last reply
                                        3
                                        • girishG girish

                                          I narrowed it down to image delete API call not getting a response. I wrote a simple example and that works 😞 So, some strange issue in the docker-modem module. Unfortunately, there's a lot of code there to investigate.

                                          I do still wonder why this happens just now...!

                                          'use strict';
                                          
                                          const http = require('http');
                                          
                                          const opts = {
                                            path: '/images/cloudron/org.moodle.cloudronapp:20220912-100537-1689a722e?force=false&noprune=false',
                                            method: 'DELETE',
                                            headers: {},
                                            key: undefined,
                                            cert: undefined,
                                            ca: undefined,
                                            socketPath: '/var/run/docker.sock'
                                          };
                                          
                                          const req = http.request(opts, function () { });
                                          req.on('response', function (res) {
                                              console.log('got a response');
                                              res.on('data', function () { console.log('data'); });
                                              res.on('end', function () { console.log('ended'); });
                                          });
                                          req.on('error', function (error) {
                                              console.log(error);
                                          });
                                          
                                          req.end();
                                          
                                          jdaviescoatesJ Offline
                                          jdaviescoatesJ Offline
                                          jdaviescoates
                                          wrote on last edited by
                                          #52

                                          @girish said in Apps Stuck Updating - Cleaning up old install - even after stopping/restarting task:

                                          I do still wonder why this happens just now...!

                                          something deprecated upstream? 🤷

                                          I use Cloudron with Gandi & Hetzner

                                          girishG 1 Reply Last reply
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